Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00068.152.v1.0.g
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Position
AmTr_scaff00068:3301118-3304512 (+)
3394bp
Gene Type
gene
Gene Description (Protein Product)
30S ribosomal protein S20
Organism
Amborella trichopoda
Also AS AT3G15190AMTR_s00068p00188920

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00140.50.v1.0.g 50S ribosomal protein L9
AmTr_scaff00160.6.v1.0.g Belongs to the universal ribosomal protein uS5 family
AmTr_scaff00077.213.v1.0.g Belongs to the bacterial ribosomal protein bL17 family
Regulatory gene
AmTr_scaff00002.671.v1.0.g B3 domain-containing protein
AmTr_scaff00003.380.v1.0.g B3 domain-containing protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009941 chloroplast envelope CC
GO:0016020 membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map03010 Ribosome -