Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00071.12.v1.0.g
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Position
AmTr_scaff00071:173801-179376 (+)
5575bp
Gene Type
gene
Gene Description (Protein Product)
subunit O
Organism
Amborella trichopoda
Also AS AT1G74880AMTR_s00071p00027790

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00115.4.v1.0.g -
AmTr_scaff00153.15.v1.0.g cysteine-rich repeat secretory protein
AmTr_scaff00077.191.v1.0.g NAD(P)H-quinone oxidoreductase subunit N
Regulatory gene
AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
AmTr_scaff00002.171.v1.0.g GATA transcription factor
AmTr_scaff00004.55.v1.0.g GATA transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009987 cellular process BP
GO:0010257 NADH dehydrogenase complex assembly BP
GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly BP
GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0034357 photosynthetic membrane CC
GO:0034622 protein-containing complex assembly BP
GO:0042651 thylakoid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055035 plastid thylakoid membrane CC
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098796 membrane protein complex CC