PPGR - Gene Detail

Gene ID	AmTr_scaff00072.128.v1.0.g View in Genome Browser
Position	AmTr_scaff00072:2994211-3049165 (-) 54954bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the STXBP unc-18 SEC1 family
Organism	Amborella trichopoda
Also AS	AT3G54860AMTR_s00072p00179290

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	AmTr_scaff00100.34.v1.0.g Vacuolar protein sorting-associated protein 8 homolog AmTr_scaff00100.36.v1.0.g Vacuolar protein sorting-associated protein 8 homolog AmTr_scaff04671.1.v1.0.g vesicle fusion with Golgi apparatus
Regulatory gene	AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6 AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005768	endosome	CC
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0030897	HOPS complex	CC
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0032991	protein-containing complex	CC
GO:0033263	CORVET complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044433	obsolete cytoplasmic vesicle part	CC
GO:0044440	obsolete endosomal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0097708	intracellular vesicle	CC
GO:0098796	membrane protein complex	CC
GO:0099023	vesicle tethering complex	CC