Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00073.44.v1.0.g
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Position
AmTr_scaff00073:2430088-2433574 (+)
3486bp
Gene Type
gene
Gene Description (Protein Product)
lanC-like protein
Organism
Amborella trichopoda
Also AS AT5G65280AMTR_s00073p00158570

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00170.9.v1.0.g belongs to the protein kinase superfamily
AmTr_scaff00171.28.v1.0.g Belongs to the MIP aquaporin (TC 1.A.8) family
AmTr_scaff00137.33.v1.0.g Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Regulatory gene
AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
AmTr_scaff00002.171.v1.0.g GATA transcription factor
AmTr_scaff00002.671.v1.0.g B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0019898 extrinsic component of membrane CC
GO:0023052 signaling BP
GO:0044425 obsolete membrane part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC