Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00074.33.v1.0.g
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Position
AmTr_scaff00074:1398806-1401655 (-)
2849bp
Gene Type
gene
Gene Description (Protein Product)
Zinc finger CCCH domain-containing protein
Organism
Amborella trichopoda
Also AS AT2G32930AMTR_s00074p00110430

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00106.104.v1.0.g Ccr4-not transcription complex
AmTr_scaff00148.14.v1.0.g mRNA-decapping enzyme subunit
AmTr_scaff00114.51.v1.0.g MRNA-decapping enzyme-like protein
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like
Target gene
AmTr_scaff00001.178.v1.0.g tRNA pseudouridine synthase
AmTr_scaff00001.216.v1.0.g
AmTr_scaff00001.323.v1.0.g -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF