Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00074.77.v1.0.g
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Position
AmTr_scaff00074:2514329-2533929 (-)
19600bp
Gene Type
gene
Gene Description (Protein Product)
lipid-A-disaccharide synthase
Organism
Amborella trichopoda
Also AS AT2G04560AMTR_s00074p00162130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00146.23.v1.0.g threonine synthase
AmTr_scaff00095.96.v1.0.g Glutamine--fructose-6-phosphate aminotransferase isomerizing
AmTr_scaff00078.155.v1.0.g Thymidylate
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005543 phospholipid binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005829 cytosol CC
GO:0005975 carbohydrate metabolic process BP
GO:0006040 amino sugar metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006643 membrane lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006664 glycolipid metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008194 UDP-glycosyltransferase activity MF
GO:0008289 lipid binding MF
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0008915 lipid-A-disaccharide synthase activity MF
GO:0009058 biosynthetic process BP
GO:0009245 lipid A biosynthetic process BP
GO:0009247 glycolipid biosynthetic process BP
GO:0009311 oligosaccharide metabolic process BP
GO:0009312 oligosaccharide biosynthetic process BP
GO:0009987 cellular process BP
GO:0016051 carbohydrate biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016758 hexosyltransferase activity MF
GO:0019637 organophosphate metabolic process BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046467 membrane lipid biosynthetic process BP
GO:0046493 lipid A metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901269 lipooligosaccharide metabolic process BP
GO:1901271 lipooligosaccharide biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1903509 liposaccharide metabolic process BP
GO:2001289 lipid X metabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -