PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff00095.33.v1.0.g View in Genome Browser
Position	AmTr_scaff00095:567616-574917 (+) 7301bp
Gene Type	gene
Gene Description (Protein Product)	Dihydropyrimidinase
Organism	Amborella trichopoda
Also AS	AT5G12200AMTR_s00095p00057460

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00096.83.v1.0.g Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration

AmTr_scaff00176.8.v1.0.g dihydropyrimidine dehydrogenase

AmTr_scaff00101.55.v1.0.g Biotin carboxylase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004157	dihydropyrimidinase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005794	Golgi apparatus	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006206	pyrimidine nucleobase metabolic process	BP
GO:0006208	pyrimidine nucleobase catabolic process	BP
GO:0006212	uracil catabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007154	cell communication	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009112	nucleobase metabolic process	BP
GO:0009605	response to external stimulus	BP
GO:0009987	cellular process	BP
GO:0009991	response to extracellular stimulus	BP
GO:0012505	endomembrane system	CC
GO:0016787	hydrolase activity	MF
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	MF
GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0019860	uracil metabolic process	BP
GO:0031667	response to nutrient levels	BP
GO:0031668	cellular response to extracellular stimulus	BP
GO:0031669	cellular response to nutrient levels	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042737	xenobiotic catabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043562	cellular response to nitrogen levels	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044270	cellular nitrogen compound catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046113	nucleobase catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046700	heterocycle catabolic process	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0071496	cellular response to external stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0072527	pyrimidine-containing compound metabolic process	BP
GO:0072529	pyrimidine-containing compound catabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00770	Pantothenate and CoA biosynthesis	-
map00410	beta-Alanine metabolism	-
map00240	Pyrimidine metabolism	-