Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00096.56.v1.0.g
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Position
AmTr_scaff00096:1202896-1214283 (+)
11387bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 28 family
Organism
Amborella trichopoda
Also AS AT1G23460AMTR_s00096p00099360

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00103.74.v1.0.g Polygalacturonase
AmTr_scaff00129.20.v1.0.g Acts in the modification of cell walls via demethylesterification of cell wall pectin
AmTr_scaff00129.45.v1.0.g Acts in the modification of cell walls via demethylesterification of cell wall pectin

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0009505 plant-type cell wall CC
GO:0030312 external encapsulating structure CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -