PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff00111.27.v1.0.g View in Genome Browser
Position	AmTr_scaff00111:533320-541801 (+) 8481bp
Gene Type	gene
Gene Description (Protein Product)	2-amino-3-ketobutyrate coenzyme A ligase
Organism	Amborella trichopoda
Also AS	AT5G04620AMTR_s00111p00055050

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00149.34.v1.0.g The H protein shuttles the methylamine group of glycine from the P protein to the T protein

AmTr_scaff00162.18.v1.0.g O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway

AmTr_scaff00146.23.v1.0.g threonine synthase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005777	peroxisome	CC
GO:0005829	cytosol	CC
GO:0006082	organic acid metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006766	vitamin metabolic process	BP
GO:0006767	water-soluble vitamin metabolic process	BP
GO:0006768	biotin metabolic process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009102	biotin biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009110	vitamin biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0017144	xenobiotic metabolic process	BP
GO:0018130	heterocycle biosynthetic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042364	water-soluble vitamin biosynthetic process	BP
GO:0042579	microbody	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043603	amide metabolic process	BP
GO:0043604	amide biosynthetic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044272	sulfur compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00780	Biotin metabolism	-