Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00111.91.v1.0.g
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Position
AmTr_scaff00111:1545976-1566449 (-)
20473bp
Gene Type
gene
Gene Description (Protein Product)
Cop9 signalosome complex subunit
Organism
Amborella trichopoda
Also AS AT1G02090AMTR_s00111p00118430

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00171.3.v1.0.g Cop9 signalosome complex subunit
AmTr_scaff00821.1.v1.0.g 26S proteasome non-ATPase regulatory subunit
AmTr_scaff02513.1.v1.0.g ATP synthase alpha/beta chain, C terminal domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000338 protein deneddylation BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0010387 COP9 signalosome assembly BP
GO:0016043 cellular component organization BP
GO:0019538 protein metabolic process BP
GO:0022607 cellular component assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0065003 protein-containing complex assembly BP
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901564 organonitrogen compound metabolic process BP