Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00138.7.v1.0.g
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Position
AmTr_scaff00138:126959-149499 (-)
22540bp
Gene Type
gene
Gene Description (Protein Product)
Protein ROOT INITIATION DEFECTIVE
Organism
Amborella trichopoda
Also AS AT3G49180AMTR_s00138p00023960

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00143.17.v1.0.g F-box-like WD repeat-containing protein
AmTr_scaff00225.2.v1.0.g Guanine nucleotide-binding protein subunit beta-like protein 1 homolog
AmTr_scaff00164.29.v1.0.g Mitotic checkpoint protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0008150 biological_process BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048509 regulation of meristem development BP
GO:0048519 negative regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051093 negative regulation of developmental process BP
GO:0065007 biological regulation BP
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:1902183 regulation of shoot apical meristem development BP
GO:1902184 negative regulation of shoot apical meristem development BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC