PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff00147.59.v1.0.g View in Genome Browser
Position	AmTr_scaff00147:1253741-1263627 (-) 9886bp
Gene Type	gene
Gene Description (Protein Product)	protein O-linked fucosylation
Organism	Amborella trichopoda
Also AS	AT1G17270AMTR_s00147p00102480

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00148.33.v1.0.g BEST Arabidopsis thaliana protein match is Protein of

AmTr_scaff00180.9.v1.0.g Protein of unknown function (DUF616)

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0006464	protein modification process	BP
GO:0006486	protein glycosylation	BP
GO:0006493	protein O-linked glycosylation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008417	fucosyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009100	glycoprotein metabolic process	BP
GO:0009101	glycoprotein biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016740	transferase activity	MF
GO:0016757	glycosyltransferase activity	MF
GO:0016758	hexosyltransferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0036065	fucosylation	BP
GO:0036066	protein O-linked fucosylation	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0043413	macromolecule glycosylation	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0046922	peptide-O-fucosyltransferase activity	MF
GO:0070085	glycosylation	BP
GO:0071704	organic substance metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map00514	Other types of O-glycan biosynthesis	O-mannosyl glycans are a type of O-glycans that are found both in eukaryotes and prokaryotes. Biosynthesis of O-mannosyl glycans is initiated by the transfer of mannose from Man-P-Dol to serine or threonine residue, which is catalyzed by protein O-mannosyltransferases POMT1 and POMT2. Defects of these genes are linked to human diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].