PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	AmTr_scaff00159.20.v1.0.g View in Genome Browser
Position	AmTr_scaff00159:562535-570627 (-) 8092bp
Gene Type	gene
Gene Description (Protein Product)	protein heterodimerization activity
Organism	Amborella trichopoda
Also AS	AT1G75600AMTR_s00159p00057110

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00175.27.v1.0.g Belongs to the RuvB family

AmTr_scaff00381.1.v1.0.g Fact complex subunit

AmTr_scaff00682.1.v1.0.g FACT complex subunit

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000070	mitotic sister chromatid segregation	BP
GO:0000228	nuclear chromosome	CC
GO:0000278	mitotic cell cycle	BP
GO:0000280	nuclear division	BP
GO:0000775	chromosome, centromeric region	CC
GO:0000776	kinetochore	CC
GO:0000779	condensed chromosome, centromeric region	CC
GO:0000780	condensed chromosome, centromeric region	CC
GO:0000785	chromatin	CC
GO:0000786	nucleosome	CC
GO:0000793	condensed chromosome	CC
GO:0000794	condensed nuclear chromosome	CC
GO:0000819	sister chromatid segregation	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003682	chromatin binding	MF
GO:0003690	double-stranded DNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0005727	extrachromosomal circular DNA	CC
GO:0005729	2-micrometer circle DNA	CC
GO:0006276	plasmid maintenance	BP
GO:0006323	chromosome organization	BP
GO:0006325	chromatin organization	BP
GO:0006333	chromatin organization	BP
GO:0006334	nucleosome assembly	BP
GO:0006996	organelle organization	BP
GO:0007049	cell cycle	BP
GO:0007059	chromosome segregation	BP
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0016043	cellular component organization	BP
GO:0019237	centromeric DNA binding	MF
GO:0022402	cell cycle process	BP
GO:0022607	cellular component assembly	BP
GO:0030541	plasmid partitioning	BP
GO:0030543	2-micrometer plasmid partitioning	BP
GO:0031490	chromatin DNA binding	MF
GO:0031491	nucleosome binding	MF
GO:0031492	nucleosomal DNA binding	MF
GO:0031497	chromatin organization	BP
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0032993	protein-DNA complex	CC
GO:0034506	chromosome, centromeric core domain	CC
GO:0034508	centromere complex assembly	BP
GO:0034622	protein-containing complex assembly	BP
GO:0034728	nucleosome organization	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043505	CENP-A containing nucleosome	CC
GO:0043565	sequence-specific DNA binding	MF
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044454	obsolete nuclear chromosome part	CC
GO:0044464	obsolete cell part	CC
GO:0044815	DNA packaging complex	CC
GO:0044877	protein-containing complex binding	MF
GO:0046821	extrachromosomal DNA	CC
GO:0048285	organelle fission	BP
GO:0051276	chromosome organization	BP
GO:0051382	kinetochore assembly	BP
GO:0051383	kinetochore organization	BP
GO:0061638	CENP-A containing chromatin	CC
GO:0065003	protein-containing complex assembly	BP
GO:0065004	protein-DNA complex assembly	BP
GO:0070013	intracellular organelle lumen	CC
GO:0070925	organelle assembly	BP
GO:0071103	DNA conformation change	BP
GO:0071824	protein-DNA complex subunit organization	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0097159	organic cyclic compound binding	MF
GO:0098687	chromosomal region	CC
GO:0098813	nuclear chromosome segregation	BP
GO:0140014	mitotic nuclear division	BP
GO:1901363	heterocyclic compound binding	MF
GO:1903047	mitotic cell cycle process	BP
GO:1990837	sequence-specific double-stranded DNA binding	MF