PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	AmTr_scaff00184.18.v1.0.g View in Genome Browser
Position	AmTr_scaff00184:357158-357367 (-) 209bp
Gene Type	gene
Gene Description (Protein Product)	phosphatidate phosphatase activity
Organism	Amborella trichopoda
Also AS	AT5G42870AMTR_s00184p00042120

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00498.1.v1.0.g DNA damage-inducible protein

AmTr_scaff00978.1.v1.0.g belongs to the protein kinase superfamily

AmTr_scaff00228.2.v1.0.g Small ubiquitin-related modifier

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000287	magnesium ion binding	MF
GO:0001067	transcription regulatory region nucleic acid binding	MF
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003712	transcription coregulator activity	MF
GO:0003713	transcription coactivator activity	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005635	nuclear envelope	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005811	lipid droplet	CC
GO:0005829	cytosol	CC
GO:0006082	organic acid metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006276	plasmid maintenance	BP
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006357	regulation of transcription by RNA polymerase II	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0006638	neutral lipid metabolic process	BP
GO:0006639	acylglycerol metabolic process	BP
GO:0006641	triglyceride metabolic process	BP
GO:0006643	membrane lipid metabolic process	BP
GO:0006644	phospholipid metabolic process	BP
GO:0006664	glycolipid metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006996	organelle organization	BP
GO:0006997	nucleus organization	BP
GO:0006998	nuclear envelope organization	BP
GO:0007029	endoplasmic reticulum organization	BP
GO:0007033	vacuole organization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008195	phosphatidate phosphatase activity	MF
GO:0008610	lipid biosynthetic process	BP
GO:0008654	phospholipid biosynthetic process	BP
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009060	aerobic respiration	BP
GO:0009062	fatty acid catabolic process	BP
GO:0009247	glycolipid biosynthetic process	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009891	positive regulation of biosynthetic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009987	cellular process	BP
GO:0010256	endomembrane system organization	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0010557	positive regulation of macromolecule biosynthetic process	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010628	positive regulation of gene expression	BP
GO:0012505	endomembrane system	CC
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016020	membrane	CC
GO:0016042	lipid catabolic process	BP
GO:0016043	cellular component organization	BP
GO:0016054	organic acid catabolic process	BP
GO:0016311	dephosphorylation	BP
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0016791	phosphatase activity	MF
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019374	galactolipid metabolic process	BP
GO:0019375	galactolipid biosynthetic process	BP
GO:0019432	triglyceride biosynthetic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019898	extrinsic component of membrane	CC
GO:0031090	organelle membrane	CC
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0031328	positive regulation of cellular biosynthetic process	BP
GO:0031965	nuclear membrane	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0034389	lipid droplet organization	BP
GO:0042144	vacuole fusion, non-autophagic	BP
GO:0042578	phosphoric ester hydrolase activity	MF
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044212	transcription cis-regulatory region binding	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044242	cellular lipid catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045017	glycerolipid biosynthetic process	BP
GO:0045333	cellular respiration	BP
GO:0045893	positive regulation of DNA-templated transcription	BP
GO:0045935	positive regulation of nucleobase-containing compound metabolic process	BP
GO:0045944	positive regulation of transcription by RNA polymerase II	BP
GO:0046395	carboxylic acid catabolic process	BP
GO:0046460	neutral lipid biosynthetic process	BP
GO:0046463	acylglycerol biosynthetic process	BP
GO:0046467	membrane lipid biosynthetic process	BP
GO:0046486	glycerolipid metabolic process	BP
GO:0046872	metal ion binding	MF
GO:0048046	apoplast	CC
GO:0048284	organelle fusion	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051254	positive regulation of RNA metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061024	membrane organization	BP
GO:0061025	membrane fusion	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071763	nuclear membrane organization	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097576	vacuole fusion	BP
GO:0140110	transcription regulator activity	MF
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1902680	positive regulation of RNA biosynthetic process	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:1903508	positive regulation of nucleic acid-templated transcription	BP
GO:1903509	liposaccharide metabolic process	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00564	Glycerophospholipid metabolism	-
map00561	Glycerolipid metabolism	-