Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00606.2.v1.0.g
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Position
AmTr_scaff00606:1872-3314 (+)
1442bp
Gene Type
gene
Gene Description (Protein Product)
"RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1
Organism
Amborella trichopoda
Also AS ATCG00490AMTR_s00606p00006850

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff01196.2.v1.0.g One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
AmTr_scaff00738.1.v1.0.g ATP synthase subunit beta
AmTr_scaff02802.1.v1.0.g ATP synthase subunit beta

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00710 Carbon fixation in photosynthetic organisms -
map00640 Propanoate metabolism -
map00630 Glyoxylate and dicarboxylate metabolism -
map00620 Pyruvate metabolism -
map00061 Fatty acid biosynthesis -