PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff04574.1.v1.0.g View in Genome Browser
Position	AmTr_scaff04574:7-189 (-) 182bp
Gene Type	gene
Gene Description (Protein Product)	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1
Organism	Amborella trichopoda
Also AS	ATMG00160AMTR_s04574p00000060

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff05271.1.v1.0.g Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Key component of the proton channel

AmTr_scaff05336.1.v1.0.g NADH dehydrogenase (Ubiquinone) iron-sulfur protein

AmTr_scaff05659.2.v1.0.g Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006119	oxidative phosphorylation	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009123	nucleoside monophosphate metabolic process	BP
GO:0009126	purine nucleoside monophosphate metabolic process	BP
GO:0009141	nucleoside triphosphate metabolic process	BP
GO:0009144	purine nucleoside triphosphate metabolic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009161	ribonucleoside monophosphate metabolic process	BP
GO:0009167	purine ribonucleoside monophosphate metabolic process	BP
GO:0009199	ribonucleoside triphosphate metabolic process	BP
GO:0009205	purine ribonucleoside triphosphate metabolic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009987	cellular process	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016310	phosphorylation	BP
GO:0017144	xenobiotic metabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0022900	electron transport chain	BP
GO:0022904	respiratory electron transport chain	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042773	ATP synthesis coupled electron transport	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0045333	cellular respiration	BP
GO:0046034	ATP metabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00190	Oxidative phosphorylation	-