PPGR - Gene Detail

Gene ID	Bpev01.c0001.g0097 View in Genome Browser
Position	Contig1:1057012-1063163 (+) 6151bp
Gene Type	gene
Gene Description (Protein Product)	Plant nuclear matrix protein 1 (NMP1)
Organism	Betula pendula
Also AS	AT5G17620

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Bpev01.c2075.g0011 HAUS augmin-like complex subunit 4 Bpev01.c0166.g0028 HAUS augmin-like complex subunit 5 Bpev01.c1167.g0013 HAUS augmin-like complex subunit
Regulatory gene	Bpev01.c0015.g0225 ZINC FINGER protein Bpev01.c0027.g0145 Dof zinc finger protein Bpev01.c0094.g0053 E2F transcription factor-like

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005819	spindle	CC
GO:0005856	cytoskeleton	CC
GO:0005874	microtubule	CC
GO:0005876	spindle microtubule	CC
GO:0008017	microtubule binding	MF
GO:0008092	cytoskeletal protein binding	MF
GO:0009524	phragmoplast	CC
GO:0015630	microtubule cytoskeleton	CC
GO:0015631	tubulin binding	MF
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0051011	microtubule minus-end binding	MF
GO:0099080	supramolecular complex	CC
GO:0099081	supramolecular polymer	CC
GO:0099512	supramolecular fiber	CC
GO:0099513	polymeric cytoskeletal fiber	CC