PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c0080.g0087 View in Genome Browser
Position	Contig80:1052387-1053315 (-) 928bp
Gene Type	gene
Gene Description (Protein Product)	Late embryogenesis abundant protein
Organism	Betula pendula
Also AS	AT1G65690

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c0949.g0005 Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Bpev01.c0568.g0004 Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Bpev01.c0214.g0002 Belongs to the glycosyl hydrolase 17 family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0008150	biological_process	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009737	response to abscisic acid	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009891	positive regulation of biosynthetic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0010033	response to organic substance	BP
GO:0010115	regulation of abscisic acid biosynthetic process	BP
GO:0010116	positive regulation of abscisic acid biosynthetic process	BP
GO:0010565	regulation of cellular ketone metabolic process	BP
GO:0016020	membrane	CC
GO:0019216	regulation of lipid metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019747	regulation of isoprenoid metabolic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0031328	positive regulation of cellular biosynthetic process	BP
GO:0033993	response to lipid	BP
GO:0042221	response to chemical	BP
GO:0043455	regulation of secondary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045828	positive regulation of isoprenoid metabolic process	BP
GO:0045834	positive regulation of lipid metabolic process	BP
GO:0046889	positive regulation of lipid biosynthetic process	BP
GO:0046890	regulation of lipid biosynthetic process	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0062012	regulation of small molecule metabolic process	BP
GO:0062013	positive regulation of small molecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071944	cell periphery	CC
GO:0080090	regulation of primary metabolic process	BP
GO:0097305	response to alcohol	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1902074	response to salt	BP
GO:1902930	regulation of alcohol biosynthetic process	BP
GO:1902932	positive regulation of alcohol biosynthetic process	BP