PPGR - Gene Detail

Gene ID	Bpev01.c0428.g0006 View in Genome Browser
Position	Contig428:71986-72793 (+) 807bp
Gene Type	gene
Gene Description (Protein Product)	GAGA binding protein-like family
Organism	Betula pendula
Also AS	AT2G35550

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Bpev01.c0778.g0005 Homeobox-leucine zipper protein Bpev01.c0518.g0007 Zinc-finger homeodomain protein Bpev01.c0472.g0003 Agamous-like MADS-box protein
Regulatory gene	Bpev01.c0015.g0225 ZINC FINGER protein Bpev01.c0027.g0145 Dof zinc finger protein Bpev01.c0121.g0036 dof zinc finger protein
Target gene	Bpev01.c0000.g0002 LRR receptor-like serine threonine-protein kinase Bpev01.c0000.g0007 Histone-lysine n-methyltransferase Bpev01.c0000.g0009 Cysteine-rich repeat secretory protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0008150	biological_process	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009723	response to ethylene	BP
GO:0009725	response to hormone	BP
GO:0010033	response to organic substance	BP
GO:0042221	response to chemical	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043565	sequence-specific DNA binding	MF
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF