PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c1721.g0001 View in Genome Browser
Position	Contig1721:1620-1998 (-) 378bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Organism	Betula pendula
Also AS	AT5G54160

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c2220.g0001 Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Bpev01.c1767.g0003 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Bpev01.c1922.g0002 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Regulatory gene

Bpev01.c0015.g0225 ZINC FINGER protein

Bpev01.c0027.g0145 Dof zinc finger protein

Bpev01.c0121.g0036 dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
map00380	Tryptophan metabolism	-