Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c2017.g0001
View in Genome Browser
Position
Contig2017:2745-16540 (+)
13795bp
Gene Type
gene
Gene Description (Protein Product)
Alpha-L-arabinofuranosidase
Organism
Betula pendula
Also AS AT3G10740

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c2911.g0002 1,4-alpha-glucan-branching enzyme 3, chloroplastic
Bpev01.c5240.g0001 Converts the aldose L-fucose into the corresponding ketose L-fuculose
Bpev01.c5430.g0001 Catalyzes the NAD-dependent oxidation of glycerol to dihydroxyacetone (glycerone). Allows microorganisms to utilize glycerol as a source of carbon under anaerobic conditions. In E.coli, an important role of GldA is also likely to regulate the intracellular level of dihydroxyacetone by catalyzing the reverse reaction, i.e. the conversion of dihydroxyacetone into glycerol. Possesses a broad substrate specificity, since it is also able to oxidize 1,2-propanediol and to reduce glycolaldehyde, methylglyoxal and hydroxyacetone into ethylene glycol, lactaldehyde and 1,2-propanediol, respectively
Regulatory gene
Bpev01.c0000.g0005 Protein PHR1-LIKE 1-like isoform
Bpev01.c0015.g0036 Floral homeotic protein APETALA
Bpev01.c0015.g0225 ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000272 polysaccharide catabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009044 xylan 1,4-beta-xylosidase activity MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009505 plant-type cell wall CC
GO:0009987 cellular process BP
GO:0010383 cell wall polysaccharide metabolic process BP
GO:0010410 hemicellulose metabolic process BP
GO:0016052 carbohydrate catabolic process BP
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0030312 external encapsulating structure CC
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044036 cell wall macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045491 xylan metabolic process BP
GO:0045493 xylan catabolic process BP
GO:0046556 alpha-L-arabinofuranosidase activity MF
GO:0048046 apoplast CC
GO:0071554 cell wall organization or biogenesis BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0097599 xylanase activity MF
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00520 Amino sugar and nucleotide sugar metabolism -