Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c2046.g0008
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Position
Contig2046:50495-58929 (+)
8434bp
Gene Type
gene
Gene Description (Protein Product)
Transcription initiation factor IIF subunit
Organism
Betula pendula
Also AS AT4G12610

Gene Structure

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Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c2368.g0001 Transcription initiation factor TFIID subunit
Bpev01.c3072.g0001 Photosystem I reaction center subunit III
Bpev01.c2611.g0001 Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase
Regulatory gene
Bpev01.c0015.g0225 ZINC FINGER protein
Bpev01.c0027.g0145 Dof zinc finger protein
Bpev01.c0089.g0050 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0008022 obsolete protein C-terminus binding MF
KEGG Term Name Description
map03022 Basal transcription factors -