Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Bpev01.c4862.g0002
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Position
Contig4862:1377-2238 (+)
861bp
Gene Type
gene
Gene Description (Protein Product)
Phage integrase family
Organism
Betula pendula
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5371.g0001 Resolvase, N terminal domain
Bpev01.c5333.g0001 N-6 DNA Methylase
Bpev01.c5400.g0001 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Regulatory gene
Bpev01.c0018.g0097 growth-regulating factor
Bpev01.c0023.g0052 Ocs element-binding factor
Bpev01.c0027.g0042 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)