Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c4927.g0002
View in Genome Browser
Position
Contig4927:1401-2412 (+)
1011bp
Gene Type
gene
Gene Description (Protein Product)
Part of the ABC transporter complex MalEFGK involved in maltose maltodextrin import. Responsible for energy coupling to the transport system
Organism
Betula pendula
Also AS AT2G41700

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5258.g0001 transporter
Bpev01.c5195.g0001 L-arabinose-binding periplasmic protein
Bpev01.c5258.g0002 ABC transporter permease protein YcjP
Regulatory gene
Bpev01.c0000.g0029 transcription factor
Bpev01.c0000.g0030 transcription factor
Bpev01.c0000.g0174 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005363 maltose transmembrane transporter activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0008134 transcription factor binding MF
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008643 carbohydrate transport BP
GO:0009898 cytoplasmic side of plasma membrane CC
GO:0015144 carbohydrate transmembrane transporter activity MF
GO:0015154 disaccharide transmembrane transporter activity MF
GO:0015157 oligosaccharide transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015422 ABC-type oligosaccharide transporter activity MF
GO:0015423 ABC-type maltose transporter activity MF
GO:0015766 disaccharide transport BP
GO:0015768 maltose transport BP
GO:0015772 oligosaccharide transport BP
GO:0015774 polysaccharide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019897 extrinsic component of plasma membrane CC
GO:0019898 extrinsic component of membrane CC
GO:0022804 active transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0030554 adenyl nucleotide binding MF
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031234 extrinsic component of cytoplasmic side of plasma membrane CC
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033037 polysaccharide localization BP
GO:0033613 DNA-binding transcription factor binding MF
GO:0034219 carbohydrate transmembrane transport BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0042623 ATP hydrolysis activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0042956 maltodextrin transmembrane transport BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043190 ATP-binding cassette (ABC) transporter complex CC
GO:0043211 ABC-type carbohydrate transporter activity MF
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0071702 organic substance transport BP
GO:0071944 cell periphery CC
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0098533 ATPase dependent transmembrane transport complex CC
GO:0098552 side of membrane CC
GO:0098562 cytoplasmic side of membrane CC
GO:0098796 membrane protein complex CC
GO:0098797 plasma membrane protein complex CC
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1902494 catalytic complex CC
GO:1902495 transmembrane transporter complex CC
GO:1904949 ATPase complex CC
GO:1990060 maltose transport complex CC
GO:1990351 transporter complex CC
KEGG Term Name Description
map02010 ABC transporters The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).