Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Bpev01.c4952.g0001
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Position
Contig4952:417-1463 (+)
1046bp
Gene Type
gene
Gene Description (Protein Product)
Phage DNA packaging protein Nu1
Organism
Betula pendula
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5567.g0003 cellulose 1,4-beta-cellobiosidase activity
Bpev01.c5370.g0001 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Bpev01.c5195.g0001 L-arabinose-binding periplasmic protein
Regulatory gene
Bpev01.c0015.g0225 ZINC FINGER protein
Bpev01.c0027.g0145 Dof zinc finger protein
Bpev01.c0042.g0028 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)