PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c4955.g0002 View in Genome Browser
Position	Contig4955:1051-1794 (+) 743bp
Gene Type	gene
Gene Description (Protein Product)	"Involved in the first step in the biosynthesis of amino- sugar-nucleotides. Catalyzes the hydrolysis of the N-acetyl group of N-acetylglucosamine-6-phosphate (GlcNAc-6-P) to yield glucosamine 6-phosphate and acetate. In vitro
Organism	Betula pendula
Also AS

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5131.g0002 The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in maltose transport. MalX can also recognize and transport glucose even though this sugar may not represent the natural substrate of the system

Bpev01.c5501.g0001 pts system

Bpev01.c5487.g0003 Catalyzes the oxidation of L-aspartate to iminoaspartate

Regulatory gene

Bpev01.c0000.g0173 Protein SENSITIVE TO PROTON RHIZOTOXICITY

Bpev01.c0015.g0167 Ethylene-responsive transcription factor-like protein

Bpev01.c0015.g0225 ZINC FINGER protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0006040	amino sugar metabolic process	BP
GO:0006044	N-acetylglucosamine metabolic process	BP
GO:0006046	N-acetylglucosamine catabolic process	BP
GO:0006054	N-acetylneuraminate metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008270	zinc ion binding	MF
GO:0008448	N-acetylglucosamine-6-phosphate deacetylase activity	MF
GO:0009056	catabolic process	BP
GO:0009987	cellular process	BP
GO:0016043	cellular component organization	BP
GO:0016054	organic acid catabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	MF
GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	MF
GO:0016999	antibiotic metabolic process	BP
GO:0017001	antibiotic catabolic process	BP
GO:0017144	xenobiotic metabolic process	BP
GO:0019213	deacetylase activity	MF
GO:0019262	N-acetylneuraminate catabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0022607	cellular component assembly	BP
GO:0042737	xenobiotic catabolic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043436	oxoacid metabolic process	BP
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0046348	amino sugar catabolic process	BP
GO:0046395	carboxylic acid catabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0051259	protein complex oligomerization	BP
GO:0051260	protein homooligomerization	BP
GO:0051262	protein tetramerization	BP
GO:0051289	protein homotetramerization	BP
GO:0065003	protein-containing complex assembly	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:1901071	glucosamine-containing compound metabolic process	BP
GO:1901072	glucosamine-containing compound catabolic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901136	carbohydrate derivative catabolic process	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00520	Amino sugar and nucleotide sugar metabolism	-