PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c5124.g0001 View in Genome Browser
Position	Contig5124:108-716 (+) 608bp
Gene Type	gene
Gene Description (Protein Product)	glycol catabolic process
Organism	Betula pendula
Also AS

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5430.g0001 Catalyzes the NAD-dependent oxidation of glycerol to dihydroxyacetone (glycerone). Allows microorganisms to utilize glycerol as a source of carbon under anaerobic conditions. In E.coli, an important role of GldA is also likely to regulate the intracellular level of dihydroxyacetone by catalyzing the reverse reaction, i.e. the conversion of dihydroxyacetone into glycerol. Possesses a broad substrate specificity, since it is also able to oxidize 1,2-propanediol and to reduce glycolaldehyde, methylglyoxal and hydroxyacetone into ethylene glycol, lactaldehyde and 1,2-propanediol, respectively

Bpev01.c5309.g0002 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis

Bpev01.c5131.g0002 The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in maltose transport. MalX can also recognize and transport glucose even though this sugar may not represent the natural substrate of the system

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004022	alcohol dehydrogenase (NAD+) activity	MF
GO:0005488	binding	MF
GO:0005506	iron ion binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006004	fucose metabolic process	BP
GO:0006066	alcohol metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008198	ferrous iron binding	MF
GO:0008912	lactaldehyde reductase activity	MF
GO:0009056	catabolic process	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0019299	rhamnose metabolic process	BP
GO:0019301	rhamnose catabolic process	BP
GO:0019317	fucose catabolic process	BP
GO:0019318	hexose metabolic process	BP
GO:0019320	hexose catabolic process	BP
GO:0019751	polyol metabolic process	BP
GO:0034311	diol metabolic process	BP
GO:0034313	diol catabolic process	BP
GO:0042354	L-fucose metabolic process	BP
GO:0042355	L-fucose catabolic process	BP
GO:0042844	glycol metabolic process	BP
GO:0042846	glycol catabolic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0044238	primary metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046164	alcohol catabolic process	BP
GO:0046174	polyol catabolic process	BP
GO:0046365	monosaccharide catabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0051143	propanediol metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901616	organic hydroxy compound catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00640	Propanoate metabolism	-
map00630	Glyoxylate and dicarboxylate metabolism	-