PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c5359.g0008 View in Genome Browser
Position	Contig5359:6723-7480 (-) 757bp
Gene Type	gene
Gene Description (Protein Product)	pyridine nucleotide-disulphide oxidoreductase
Organism	Betula pendula
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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5430.g0001 Catalyzes the NAD-dependent oxidation of glycerol to dihydroxyacetone (glycerone). Allows microorganisms to utilize glycerol as a source of carbon under anaerobic conditions. In E.coli, an important role of GldA is also likely to regulate the intracellular level of dihydroxyacetone by catalyzing the reverse reaction, i.e. the conversion of dihydroxyacetone into glycerol. Possesses a broad substrate specificity, since it is also able to oxidize 1,2-propanediol and to reduce glycolaldehyde, methylglyoxal and hydroxyacetone into ethylene glycol, lactaldehyde and 1,2-propanediol, respectively

Bpev01.c5615.g0002 Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal domain of TorC, then from the N-terminus to the C-terminus, and finally to TorA. TorC apocytochrome negatively autoregulates the torCAD operon probably by inhibiting the TorS kinase activity

Bpev01.c5459.g0002 Pfam:DUF3457

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0006082	organic acid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006805	xenobiotic metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009410	response to xenobiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016999	antibiotic metabolic process	BP
GO:0017001	antibiotic catabolic process	BP
GO:0017144	xenobiotic metabolic process	BP
GO:0018962	3-phenylpropionate metabolic process	BP
GO:0019380	3-phenylpropionate catabolic process	BP
GO:0019439	aromatic compound catabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0042178	xenobiotic catabolic process	BP
GO:0042221	response to chemical	BP
GO:0042537	benzene-containing compound metabolic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0046395	carboxylic acid catabolic process	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071466	cellular response to xenobiotic stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map01100	Metabolic pathways	-
map00360	Phenylalanine metabolism	-
map00071	Fatty acid metabolism	-