PPGR - Gene Detail

Basic Information

Gene ID	CSS0001102.g View in Genome Browser
Position	Contig826:268443-272750 (+) 4307bp
Gene Type	gene
Gene Description (Protein Product)	homeobox-leucine zipper protein
Organism	Camellia sinensis
Also AS	AT1G69780

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CSS0013302.g TATA-box-binding protein

CSS0032923.g Transcription initiation factor

CSS0003279.g Transcription initiation factor

Target gene

CSS0000008.g DNA RNA polymerases superfamily protein

CSS0000026.g BED zinc finger

CSS0000135.g Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0001101	response to acid chemical	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0006355	regulation of DNA-templated transcription	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009739	response to gibberellin	BP
GO:0009743	response to carbohydrate	BP
GO:0009744	response to sucrose	BP
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009965	leaf morphogenesis	BP
GO:0010016	shoot system morphogenesis	BP
GO:0010033	response to organic substance	BP
GO:0010154	fruit development	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022414	reproductive process	BP
GO:0022622	root system development	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0033993	response to lipid	BP
GO:0034285	response to disaccharide	BP
GO:0042221	response to chemical	BP
GO:0043565	sequence-specific DNA binding	MF
GO:0048316	seed development	BP
GO:0048364	root development	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048598	embryonic morphogenesis	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048825	cotyledon development	BP
GO:0048826	cotyledon morphogenesis	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061458	reproductive system development	BP
GO:0065007	biological regulation	BP
GO:0080022	primary root development	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090698	post-embryonic plant morphogenesis	BP
GO:0097159	organic cyclic compound binding	MF
GO:0099402	plant organ development	BP
GO:0140110	transcription regulator activity	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901700	response to oxygen-containing compound	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:1905392	plant organ morphogenesis	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP