Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0018890.g
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Position
Chr1:124933537-124940686 (-)
7149bp
Gene Type
gene
Gene Description (Protein Product)
Iron-sulphur cluster biosynthesis
Organism
Camellia sinensis
Also AS AT1G10500

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0042805.g transferase CAF17 homolog
CSS0027133.g transferase CAF17 homolog
CSS0026964.g Catalyzes the ferrous insertion into protoporphyrin IX
Regulatory gene
CSS0000556.g transcription factor
CSS0000859.g MADS-box transcription factor
CSS0001631.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005506 iron ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008198 ferrous iron binding MF
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016043 cellular component organization BP
GO:0016226 iron-sulfur cluster assembly BP
GO:0019538 protein metabolic process BP
GO:0022607 cellular component assembly BP
GO:0031163 metallo-sulfur cluster assembly BP
GO:0031974 membrane-enclosed lumen CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048037 obsolete cofactor binding MF
GO:0051186 obsolete cofactor metabolic process BP
GO:0051536 iron-sulfur cluster binding MF
GO:0051537 2 iron, 2 sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0051604 protein maturation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097428 protein maturation by iron-sulfur cluster transfer BP
GO:1901564 organonitrogen compound metabolic process BP