Basic Information
Gene ID
Position
Chr14:57649862-57652900 (+)
3038bp
Gene Type
gene
Gene Description (Protein Product)
RNA recognition motif
Organism
Also AS AT3G56860

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0036661.g Heterogeneous nuclear ribonucleoprotein
CSS0026528.g RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
CSS0045998.g RNA recognition motif
Regulatory gene
CSS0004360.g Dof zinc finger protein
CSS0004951.g dof zinc finger protein
CSS0012691.g Dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.