Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0029794.g
View in Genome Browser
Position
Chr13:95464032-95465553 (-)
1521bp
Gene Type
gene
Gene Description (Protein Product)
Phytochrome A-associated F-box
Organism
Camellia sinensis
Also AS AT4G02440

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0040580.g Belongs to the SKP1 family
CSS0049298.g Belongs to the SKP1 family
CSS0034106.g Belongs to the SKP1 family
Regulatory gene
CSS0004712.g GAGA binding protein-like family
CSS0007067.g Protein BASIC PENTACYSTEINE6-like
CSS0008658.g Protein BASIC PENTACYSTEINE2-like

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007602 phototransduction BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009581 detection of external stimulus BP
GO:0009582 detection of abiotic stimulus BP
GO:0009583 detection of light stimulus BP
GO:0009585 red, far-red light phototransduction BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009648 photoperiodism BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010017 red or far-red light signaling pathway BP
GO:0010099 regulation of photomorphogenesis BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0022414 reproductive process BP
GO:0023052 signaling BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048573 photoperiodism, flowering BP
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071489 cellular response to red or far red light BP
GO:0071704 organic substance metabolic process BP
GO:0099402 plant organ development BP
GO:0104004 cellular response to environmental stimulus BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000030 regulation of response to red or far red light BP