Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0030030.g
View in Genome Browser
Position
Contig211:813528-817622 (+)
4094bp
Gene Type
gene
Gene Description (Protein Product)
TATA box-binding protein-associated factor RNA polymerase I subunit
Organism
Camellia sinensis
Also AS AT2G02955

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0038705.g DNA-directed RNA polymerases II, IV and V subunit
CSS0048006.g DNA-directed RNA polymerases II
CSS0035973.g Nuclear cap-binding protein subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000120 RNA polymerase I transcription regulator complex CC
GO:0000976 transcription cis-regulatory region binding MF
GO:0001013 RNA polymerase I transcription regulatory region sequence-specific DNA binding MF
GO:0001046 core promoter sequence-specific DNA binding MF
GO:0001047 core promoter sequence-specific DNA binding MF
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0001163 RNA polymerase I transcription regulatory region sequence-specific DNA binding MF
GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding MF
GO:0001188 RNA polymerase I preinitiation complex assembly BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003690 double-stranded DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005667 transcription regulator complex CC
GO:0005668 RNA polymerase transcription factor SL1 complex CC
GO:0005730 nucleolus CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006351 DNA-templated transcription BP
GO:0006352 DNA-templated transcription initiation BP
GO:0006360 transcription by RNA polymerase I BP
GO:0006361 transcription initiation at RNA polymerase I promoter BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0010467 gene expression BP
GO:0016043 cellular component organization BP
GO:0016070 RNA metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032774 RNA biosynthetic process BP
GO:0032991 protein-containing complex CC
GO:0034622 protein-containing complex assembly BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043565 sequence-specific DNA binding MF
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044212 transcription cis-regulatory region binding MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044452 obsolete nucleolar part CC
GO:0044464 obsolete cell part CC
GO:0044798 transcription regulator complex CC
GO:0046483 heterocycle metabolic process BP
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0065003 protein-containing complex assembly BP
GO:0065004 protein-DNA complex assembly BP
GO:0070013 intracellular organelle lumen CC
GO:0070860 RNA polymerase I core factor complex CC
GO:0070897 transcription preinitiation complex assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097659 nucleic acid-templated transcription BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901576 organic substance biosynthetic process BP
GO:1990837 sequence-specific double-stranded DNA binding MF