Basic Information
Gene ID
Position
Chr5:119295568-119305103 (-)
9535bp
Gene Type
gene
Gene Description (Protein Product)
Methylenetetrahydrofolate reductase
Organism
Also AS AT2G44160

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0050050.g Interconversion of serine and glycine
CSS0032127.g Interconversion of serine and glycine
CSS0030713.g Interconversion of serine and glycine
Regulatory gene
CSS0000220.g Transcription factor
CSS0000442.g transcription factor
CSS0000465.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006730 one-carbon metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0016491 oxidoreductase activity MF
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors MF
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor MF
GO:0044237 cellular metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0055114 obsolete oxidation-reduction process BP
KEGG Term Name Description
map03440 Homologous recombination Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
map01100 Metabolic pathways -
map00670 One carbon pool by folate -