PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	CSS0032491.g View in Genome Browser
Position	Chr1:210986833-210990794 (-) 3961bp
Gene Type	gene
Gene Description (Protein Product)	Thymidylate
Organism	Camellia sinensis
Also AS	AT5G59440

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	CSS0034089.g Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism CSS0049814.g 5'-nucleotidase CSS0040424.g 5'-nucleotidase
Regulatory gene	CSS0004360.g Dof zinc finger protein CSS0004951.g dof zinc finger protein CSS0012691.g Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004798	thymidylate kinase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005654	nucleoplasm	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006220	pyrimidine nucleotide metabolic process	BP
GO:0006221	pyrimidine nucleotide biosynthetic process	BP
GO:0006227	dUDP biosynthetic process	BP
GO:0006233	dTDP biosynthetic process	BP
GO:0006235	dTTP biosynthetic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009041	uridylate kinase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009123	nucleoside monophosphate metabolic process	BP
GO:0009132	nucleoside diphosphate metabolic process	BP
GO:0009133	nucleoside diphosphate biosynthetic process	BP
GO:0009138	pyrimidine nucleoside diphosphate metabolic process	BP
GO:0009139	pyrimidine nucleoside diphosphate biosynthetic process	BP
GO:0009141	nucleoside triphosphate metabolic process	BP
GO:0009142	nucleoside triphosphate biosynthetic process	BP
GO:0009147	pyrimidine nucleoside triphosphate metabolic process	BP
GO:0009148	pyrimidine nucleoside triphosphate biosynthetic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009186	deoxyribonucleoside diphosphate metabolic process	BP
GO:0009189	deoxyribonucleoside diphosphate biosynthetic process	BP
GO:0009196	pyrimidine deoxyribonucleoside diphosphate metabolic process	BP
GO:0009197	pyrimidine deoxyribonucleoside diphosphate biosynthetic process	BP
GO:0009200	deoxyribonucleoside triphosphate metabolic process	BP
GO:0009202	deoxyribonucleoside triphosphate biosynthetic process	BP
GO:0009211	pyrimidine deoxyribonucleoside triphosphate metabolic process	BP
GO:0009212	pyrimidine deoxyribonucleoside triphosphate biosynthetic process	BP
GO:0009219	pyrimidine deoxyribonucleotide metabolic process	BP
GO:0009221	pyrimidine deoxyribonucleotide biosynthetic process	BP
GO:0009262	deoxyribonucleotide metabolic process	BP
GO:0009263	deoxyribonucleotide biosynthetic process	BP
GO:0009265	2'-deoxyribonucleotide biosynthetic process	BP
GO:0009394	2'-deoxyribonucleotide metabolic process	BP
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0009987	cellular process	BP
GO:0010154	fruit development	BP
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016776	phosphotransferase activity, phosphate group as acceptor	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019205	nucleobase-containing compound kinase activity	MF
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019692	deoxyribose phosphate metabolic process	BP
GO:0022414	reproductive process	BP
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046072	dTDP metabolic process	BP
GO:0046075	dTTP metabolic process	BP
GO:0046077	dUDP metabolic process	BP
GO:0046385	deoxyribose phosphate biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046940	nucleoside monophosphate phosphorylation	BP
GO:0048316	seed development	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0050145	nucleoside monophosphate kinase activity	MF
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0061458	reproductive system development	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071704	organic substance metabolic process	BP
GO:0072527	pyrimidine-containing compound metabolic process	BP
GO:0072528	pyrimidine-containing compound biosynthetic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00240	Pyrimidine metabolism	-