Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0033467.g
View in Genome Browser
Position
Chr3:172845872-172850514 (+)
4642bp
Gene Type
gene
Gene Description (Protein Product)
Rop guanine nucleotide exchange factor
Organism
Camellia sinensis
Also AS AT4G00460

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0049772.g Belongs to the small GTPase superfamily. Rho family
CSS0048900.g Belongs to the small GTPase superfamily. Rho family
CSS0041001.g receptor-like protein kinase
Regulatory gene
CSS0000556.g transcription factor
CSS0000859.g MADS-box transcription factor
CSS0002234.g Agamous-like MADS-box protein AGL12

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002376 immune system process BP
GO:0003674 molecular_function MF
GO:0005085 guanyl-nucleotide exchange factor activity MF
GO:0005088 guanyl-nucleotide exchange factor activity MF
GO:0005089 guanyl-nucleotide exchange factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005886 plasma membrane CC
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009505 plant-type cell wall CC
GO:0009531 secondary cell wall CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009620 response to fungus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009664 plant-type cell wall organization BP
GO:0009814 defense response to other organism BP
GO:0009817 defense response to fungus BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0017016 small GTPase binding MF
GO:0017048 small GTPase binding MF
GO:0019899 enzyme binding MF
GO:0021700 developmental maturation BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0030312 external encapsulating structure CC
GO:0031267 small GTPase binding MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0040007 growth BP
GO:0043207 response to external biotic stimulus BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0045229 external encapsulating structure organization BP
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048767 root hair elongation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051020 GTPase binding MF
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071695 anatomical structure maturation BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0080147 root hair cell development BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0098542 defense response to other organism BP
GO:0098772 molecular function regulator activity MF
GO:0099402 plant organ development BP
GO:1905392 plant organ morphogenesis BP