Basic Information
Gene ID
Position
Chr5:12658769-12661384 (-)
2615bp
Gene Type
gene
Gene Description (Protein Product)
Acts in the modification of cell walls via demethylesterification of cell wall pectin
Organism
Also AS AT4G33220

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0043799.g Pectate lyase
CSS0040640.g Polygalacturonase
CSS0042608.g Polygalacturonase-like
Regulatory gene
CSS0000128.g tesmin tso1-like cxc
CSS0000305.g Zinc finger protein
CSS0000556.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004857 enzyme inhibitor activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0009505 plant-type cell wall CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0030234 enzyme regulator activity MF
GO:0030312 external encapsulating structure CC
GO:0030599 pectinesterase activity MF
GO:0042742 defense response to bacterium BP
GO:0043086 negative regulation of catalytic activity BP
GO:0043207 response to external biotic stimulus BP
GO:0044092 negative regulation of molecular function BP
GO:0044464 obsolete cell part CC
GO:0046910 pectinesterase inhibitor activity MF
GO:0050790 regulation of catalytic activity BP
GO:0050829 defense response to Gram-negative bacterium BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0052689 carboxylic ester hydrolase activity MF
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071944 cell periphery CC
GO:0098542 defense response to other organism BP
GO:0098772 molecular function regulator activity MF
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -