Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0041467.g
View in Genome Browser
Position
Chr2:91387674-91419006 (+)
31332bp
Gene Type
gene
Gene Description (Protein Product)
Autophagy protein 16 (ATG16)
Organism
Camellia sinensis
Also AS AT5G50230

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0046772.g Autophagy-related protein
CSS0045715.g Autophagy-related protein
CSS0047563.g Belongs to the ATG8 family
Regulatory gene
CSS0000305.g Zinc finger protein
CSS0001087.g ZINC FINGER protein
CSS0002339.g zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0000421 autophagosome membrane CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005776 autophagosome CC
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006897 endocytosis BP
GO:0006907 pinocytosis BP
GO:0006909 phagocytosis BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0010498 proteasomal protein catabolic process BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016236 macroautophagy BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019776 Atg8 ligase activity MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0022607 cellular component assembly BP
GO:0030163 protein catabolic process BP
GO:0030587 sorocarp development BP
GO:0031090 organelle membrane CC
GO:0031154 culmination involved in sorocarp development BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0034274 Atg12-Atg5-Atg16 complex CC
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051703 biological process involved in intraspecies interaction between organisms BP
GO:0051704 obsolete multi-organism process BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0070925 organelle assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090382 phagosome maturation BP
GO:0090702 socially cooperative development BP
GO:0098588 bounding membrane of organelle CC
GO:0098657 import into cell BP
GO:0098805 membrane CC
GO:0099120 socially cooperative development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1902494 catalytic complex CC
GO:1905037 autophagosome organization BP
GO:1990234 transferase complex CC