Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0041820.g
View in Genome Browser
Position
Chr8:159759584-159762001 (+)
2417bp
Gene Type
gene
Gene Description (Protein Product)
Polygalacturonase
Organism
Camellia sinensis
Also AS AT4G20050

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0046296.g 4-coumarate--CoA ligase-like
CSS0048777.g helix loop helix domain
CSS0042879.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Regulatory gene
CSS0004712.g GAGA binding protein-like family
CSS0007067.g Protein BASIC PENTACYSTEINE6-like
CSS0008658.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004650 polygalacturonase activity MF
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009555 pollen development BP
GO:0009556 microsporogenesis BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0010208 pollen wall assembly BP
GO:0010584 pollen exine formation BP
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0016043 cellular component organization BP
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030198 extracellular matrix organization BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0034293 sexual sporulation BP
GO:0043062 extracellular structure organization BP
GO:0043934 sporulation BP
GO:0044085 cellular component biogenesis BP
GO:0044703 multi-organism reproductive process BP
GO:0045229 external encapsulating structure organization BP
GO:0048229 gametophyte development BP
GO:0048236 plant-type sporogenesis BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051321 meiotic cell cycle BP
GO:0051704 obsolete multi-organism process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0085029 extracellular matrix assembly BP
GO:1903046 meiotic cell cycle process BP