PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	CSS0042720.g View in Genome Browser
Position	Chr2:48441208-48462144 (+) 20936bp
Gene Type	gene
Gene Description (Protein Product)	SacI homology domain
Organism	Camellia sinensis
Also AS	AT5G66020

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	CSS0045720.g CSS0050154.g phosphatidylinositol 4-phosphate 5-kinase CSS0044160.g phosphatidylinositol 4-phosphate 5-kinase
Regulatory gene	CSS0000305.g Zinc finger protein CSS0001087.g ZINC FINGER protein CSS0001219.g ZF-HD protein dimerisation region

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000902	cell morphogenesis	BP
GO:0000904	cell morphogenesis involved in differentiation	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005789	endoplasmic reticulum membrane	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006629	lipid metabolic process	BP
GO:0006644	phospholipid metabolic process	BP
GO:0006650	glycerophospholipid metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009506	plasmodesma	CC
GO:0009611	response to wounding	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009651	response to salt stress	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009826	unidimensional cell growth	BP
GO:0009888	tissue development	BP
GO:0009932	cell tip growth	BP
GO:0009987	cellular process	BP
GO:0010015	root morphogenesis	BP
GO:0010053	root epidermal cell differentiation	BP
GO:0010054	trichoblast differentiation	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016049	cell growth	BP
GO:0016311	dephosphorylation	BP
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0016791	phosphatase activity	MF
GO:0019637	organophosphate metabolic process	BP
GO:0021700	developmental maturation	BP
GO:0022622	root system development	BP
GO:0030054	cell junction	CC
GO:0030154	cell differentiation	BP
GO:0030258	lipid modification	BP
GO:0030427	site of polarized growth	CC
GO:0031520	plasma membrane of cell tip	CC
GO:0031984	organelle subcompartment	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032989	cellular component morphogenesis	BP
GO:0034596	phosphatidylinositol phosphate 4-phosphatase activity	MF
GO:0035618	root hair	CC
GO:0035619	root hair tip	CC
GO:0035838	growing cell tip	CC
GO:0040007	growth	BP
GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	CC
GO:0042578	phosphoric ester hydrolase activity	MF
GO:0042995	cell projection	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043812	phosphatidylinositol-4-phosphate phosphatase activity	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044463	obsolete cell projection part	CC
GO:0044464	obsolete cell part	CC
GO:0046486	glycerolipid metabolic process	BP
GO:0046488	phosphatidylinositol metabolic process	BP
GO:0046839	phospholipid dephosphorylation	BP
GO:0046856	phosphatidylinositol dephosphorylation	BP
GO:0048364	root development	BP
GO:0048468	cell development	BP
GO:0048469	cell maturation	BP
GO:0048588	developmental cell growth	BP
GO:0048589	developmental growth	BP
GO:0048731	system development	BP
GO:0048764	trichoblast maturation	BP
GO:0048765	root hair cell differentiation	BP
GO:0048767	root hair elongation	BP
GO:0048768	root hair cell tip growth	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050896	response to stimulus	BP
GO:0051286	cell tip	CC
GO:0052744	phosphatidylinositol monophosphate phosphatase activity	MF
GO:0052866	phosphatidylinositol phosphate phosphatase activity	MF
GO:0055044	symplast	CC
GO:0060560	developmental growth involved in morphogenesis	BP
GO:0071695	anatomical structure maturation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0080147	root hair cell development	BP
GO:0090404	pollen tube tip	CC
GO:0090406	pollen tube	CC
GO:0090558	plant epidermis development	BP
GO:0090627	plant epidermal cell differentiation	BP
GO:0098590	plasma membrane region	CC
GO:0098827	endoplasmic reticulum subcompartment	CC
GO:0099402	plant organ development	BP
GO:0120025	plasma membrane bounded cell projection	CC
GO:0120038	obsolete plasma membrane bounded cell projection part	CC
GO:1905392	plant organ morphogenesis	BP

KEGG Term	Name	Description
map04070	Phosphatidylinositol signaling system	-
map01100	Metabolic pathways	-
map00562	Inositol phosphate metabolism	-