Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0043628.g
View in Genome Browser
Position
Contig525:38356-39934 (+)
1578bp
Gene Type
gene
Gene Description (Protein Product)
ABC transporter C family member
Organism
Camellia sinensis
Also AS AT2G34660

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0045395.g MADS-box protein
CSS0043640.g MADS-box transcription factor
CSS0049884.g MADS-box protein SOC1-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000325 plant-type vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006820 monoatomic anion transport BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0008490 arsenite secondary active transmembrane transporter activity MF
GO:0008509 monoatomic anion transmembrane transporter activity MF
GO:0009506 plasmodesma CC
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015103 inorganic anion transmembrane transporter activity MF
GO:0015105 arsenite transmembrane transporter activity MF
GO:0015291 secondary active transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015446 ATPase-coupled arsenite transmembrane transporter activity MF
GO:0015698 inorganic anion transport BP
GO:0015700 arsenite transport BP
GO:0016020 membrane CC
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity MF
GO:0022804 active transmembrane transporter activity MF
GO:0022853 active monoatomic ion transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030054 cell junction CC
GO:0031090 organelle membrane CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042221 response to chemical BP
GO:0042623 ATP hydrolysis activity MF
GO:0042625 ATPase-coupled ion transmembrane transporter activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0042946 glucoside transport BP
GO:0042947 glucoside transmembrane transporter activity MF
GO:0043225 ATPase-coupled inorganic anion transmembrane transporter activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046685 response to arsenic-containing substance BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055044 symplast CC
GO:0055085 transmembrane transport BP
GO:0071702 organic substance transport BP
GO:0090662 transmembrane transport BP
GO:0098588 bounding membrane of organelle CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098656 monoatomic anion transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098805 membrane CC
GO:0099131 monoatomic ion transmembrane transport BP
GO:0099132 monoatomic cation transmembrane transport BP
GO:0099133 monoatomic anion transmembrane transport BP
GO:1901264 carbohydrate derivative transport BP
GO:1901505 carbohydrate derivative transmembrane transporter activity MF
GO:1901656 glycoside transport BP
GO:1901683 arsenate ion transmembrane transporter activity MF
GO:1901684 arsenate ion transmembrane transport BP
GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity MF
GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport BP
KEGG Term Name Description
map02010 ABC transporters The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
map02010 ABC transporters The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).