Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0043889.g
View in Genome Browser
Position
Chr3:173346270-173347415 (-)
1145bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes medium subunit family
Organism
Camellia sinensis
Also AS AT1G60780

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0047858.g Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules
CSS0044650.g adaptor complexes medium subunit family
CSS0044696.g Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
Regulatory gene
CSS0000305.g Zinc finger protein
CSS0000333.g Homeobox-leucine zipper protein
CSS0000556.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0000323 lytic vacuole CC
GO:0001775 cell activation BP
GO:0002252 immune effector process BP
GO:0002263 cell activation involved in immune response BP
GO:0002274 myeloid leukocyte activation BP
GO:0002275 myeloid cell activation involved in immune response BP
GO:0002283 neutrophil activation involved in immune response BP
GO:0002366 leukocyte activation involved in immune response BP
GO:0002376 immune system process BP
GO:0002443 leukocyte mediated immunity BP
GO:0002444 myeloid leukocyte mediated immunity BP
GO:0002446 neutrophil mediated immunity BP
GO:0002478 antigen processing and presentation of exogenous peptide antigen BP
GO:0002495 antigen processing and presentation of peptide antigen via MHC class II BP
GO:0002504 antigen processing and presentation of peptide or polysaccharide antigen via MHC class II BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005765 lysosomal membrane CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006955 immune response BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0019882 antigen processing and presentation BP
GO:0019884 antigen processing and presentation of exogenous antigen BP
GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II BP
GO:0021700 developmental maturation BP
GO:0030135 coated vesicle CC
GO:0030136 clathrin-coated vesicle CC
GO:0030141 secretory granule CC
GO:0030154 cell differentiation BP
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030662 coated vesicle membrane CC
GO:0030665 clathrin-coated vesicle membrane CC
GO:0030667 secretory granule membrane CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032438 melanosome organization BP
GO:0032502 developmental process BP
GO:0032588 trans-Golgi network membrane CC
GO:0032940 secretion by cell BP
GO:0033059 cellular pigmentation BP
GO:0035579 specific granule membrane CC
GO:0035646 endosome to melanosome transport BP
GO:0036230 granulocyte activation BP
GO:0042119 neutrophil activation BP
GO:0042581 specific granule CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043299 leukocyte degranulation BP
GO:0043312 neutrophil degranulation BP
GO:0043473 pigmentation BP
GO:0043476 pigment accumulation BP
GO:0043482 cellular pigment accumulation BP
GO:0043485 endosome to pigment granule transport BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045055 regulated exocytosis BP
GO:0045321 leukocyte activation BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048002 antigen processing and presentation of peptide antigen BP
GO:0048066 developmental pigmentation BP
GO:0048753 pigment granule organization BP
GO:0048757 pigment granule maturation BP
GO:0048869 cellular developmental process BP
GO:0050690 mitigation of host antiviral defense response BP
GO:0050896 response to stimulus BP
GO:0050931 pigment cell differentiation BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098805 membrane CC
GO:0098852 lytic vacuole membrane CC
GO:0099503 secretory vesicle CC