PPGR - Gene Detail

Basic Information

Gene ID	CSS0044321.g View in Genome Browser
Position	Contig954:144521-145819 (+) 1298bp
Gene Type	gene
Gene Description (Protein Product)	Retinal pigment epithelial membrane protein
Organism	Camellia sinensis
Also AS	AT3G24220

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CSS0049351.g Xanthoxin

CSS0049162.g Catalyzes the oxidation of L-aspartate to iminoaspartate

CSS0045670.g Catalyzes the oxidation of L-aspartate to iminoaspartate

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006066	alcohol metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006714	sesquiterpenoid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006721	terpenoid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009639	response to red or far red light	BP
GO:0009687	abscisic acid metabolic process	BP
GO:0009688	abscisic acid biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010114	response to red light	BP
GO:0010436	carotenoid dioxygenase activity	MF
GO:0016020	membrane	CC
GO:0016053	organic acid biosynthetic process	BP
GO:0016106	sesquiterpenoid biosynthetic process	BP
GO:0016114	terpenoid biosynthetic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	MF
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0034357	photosynthetic membrane	CC
GO:0042651	thylakoid membrane	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043288	apocarotenoid metabolic process	BP
GO:0043289	apocarotenoid biosynthetic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	MF
GO:0046165	alcohol biosynthetic process	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0050896	response to stimulus	BP
GO:0051213	dioxygenase activity	MF
GO:0055035	plastid thylakoid membrane	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP
GO:1902644	tertiary alcohol metabolic process	BP
GO:1902645	tertiary alcohol biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00906	Carotenoid biosynthesis	-