PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	CSS0044815.g View in Genome Browser
Position	Chr1:112309042-112309883 (-) 841bp
Gene Type	gene
Gene Description (Protein Product)	(NAC) domain-containing protein
Organism	Camellia sinensis
Also AS

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Regulatory gene

CSS0000556.g transcription factor

CSS0000859.g MADS-box transcription factor

CSS0001450.g NAC domain-containing protein 21

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001067	transcription regulatory region nucleic acid binding	MF
GO:0002230	positive regulation of defense response to virus by host	BP
GO:0002237	response to molecule of bacterial origin	BP
GO:0002376	immune system process	BP
GO:0002682	regulation of immune system process	BP
GO:0002697	regulation of immune effector process	BP
GO:0002831	regulation of response to biotic stimulus	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0003712	transcription coregulator activity	MF
GO:0003713	transcription coactivator activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005886	plasma membrane	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006955	immune response	BP
GO:0008150	biological_process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009314	response to radiation	BP
GO:0009409	response to cold	BP
GO:0009416	response to light stimulus	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009615	response to virus	BP
GO:0009617	response to bacterium	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009642	response to light intensity	BP
GO:0009644	response to high light intensity	BP
GO:0009814	defense response to other organism	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009891	positive regulation of biosynthetic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009962	regulation of flavonoid biosynthetic process	BP
GO:0009966	regulation of signal transduction	BP
GO:0009967	positive regulation of signal transduction	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010200	response to chitin	BP
GO:0010243	response to organonitrogen compound	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0010557	positive regulation of macromolecule biosynthetic process	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010628	positive regulation of gene expression	BP
GO:0010646	regulation of cell communication	BP
GO:0010647	positive regulation of cell communication	BP
GO:0016020	membrane	CC
GO:0016032	viral process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0023051	regulation of signaling	BP
GO:0023056	positive regulation of signaling	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0031328	positive regulation of cellular biosynthetic process	BP
GO:0031347	regulation of defense response	BP
GO:0032101	regulation of response to external stimulus	BP
GO:0033554	cellular response to stress	BP
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043621	protein self-association	MF
GO:0043900	obsolete regulation of multi-organism process	BP
GO:0044212	transcription cis-regulatory region binding	MF
GO:0044403	biological process involved in symbiotic interaction	BP
GO:0044419	biological process involved in interspecies interaction between organisms	BP
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0045087	innate immune response	BP
GO:0045893	positive regulation of DNA-templated transcription	BP
GO:0045935	positive regulation of nucleobase-containing compound metabolic process	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0050688	regulation of defense response to virus	BP
GO:0050691	regulation of defense response to virus by host	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051254	positive regulation of RNA metabolic process	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0070417	cellular response to cold	BP
GO:0071944	cell periphery	CC
GO:0080090	regulation of primary metabolic process	BP
GO:0080134	regulation of response to stress	BP
GO:0080135	regulation of cellular response to stress	BP
GO:0097159	organic cyclic compound binding	MF
GO:0098542	defense response to other organism	BP
GO:0140110	transcription regulator activity	MF
GO:1900101	regulation of endoplasmic reticulum unfolded protein response	BP
GO:1900103	positive regulation of endoplasmic reticulum unfolded protein response	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901698	response to nitrogen compound	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1902680	positive regulation of RNA biosynthetic process	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:1903508	positive regulation of nucleic acid-templated transcription	BP
GO:1905897	regulation of response to endoplasmic reticulum stress	BP
GO:1905898	positive regulation of response to endoplasmic reticulum stress	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP