Basic Information
Gene ID
Position
Chr2:92758617-92761740 (-)
3123bp
Gene Type
gene
Gene Description (Protein Product)
Nucleoside diphosphate kinase
Organism
Also AS AT5G63310

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0049044.g mitogen-activated protein kinase
CSS0046218.g Nucleoside diphosphate kinase
CSS0048451.g serine threonine-protein phosphatase
Regulatory gene
CSS0004712.g GAGA binding protein-like family
CSS0007067.g Protein BASIC PENTACYSTEINE6-like
CSS0008658.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004550 nucleoside diphosphate kinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006165 nucleoside diphosphate phosphorylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007602 phototransduction BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009132 nucleoside diphosphate metabolic process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009579 thylakoid CC
GO:0009581 detection of external stimulus BP
GO:0009582 detection of abiotic stimulus BP
GO:0009583 detection of light stimulus BP
GO:0009585 red, far-red light phototransduction BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009636 response to toxic substance BP
GO:0009639 response to red or far red light BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009734 auxin-activated signaling pathway BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010017 red or far-red light signaling pathway BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016776 phosphotransferase activity, phosphate group as acceptor MF
GO:0019205 nucleobase-containing compound kinase activity MF
GO:0019637 organophosphate metabolic process BP
GO:0023052 signaling BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032870 cellular response to hormone stimulus BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0046677 response to antibiotic BP
GO:0046939 nucleotide phosphorylation BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071365 cellular response to auxin stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071489 cellular response to red or far red light BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0104004 cellular response to environmental stimulus BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00240 Pyrimidine metabolism -
map00230 Purine metabolism -