PPGR - Gene Detail

Basic Information

Gene ID	CSS0045890.g View in Genome Browser
Position	Chr7:34556508-34561329 (+) 4821bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class-I aminoacyl-tRNA synthetase family
Organism	Camellia sinensis
Also AS	AT2G33840

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CSS0048825.g Belongs to the class-I aminoacyl-tRNA synthetase family

CSS0047432.g component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Regulatory gene

CSS0000128.g tesmin tso1-like cxc

CSS0000158.g transcription factor

CSS0000831.g transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004812	aminoacyl-tRNA ligase activity	MF
GO:0004831	tyrosine-tRNA ligase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005524	ATP binding	MF
GO:0006082	organic acid metabolic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006399	tRNA metabolic process	BP
GO:0006412	translation	BP
GO:0006418	tRNA aminoacylation for protein translation	BP
GO:0006437	tyrosyl-tRNA aminoacylation	BP
GO:0006518	peptide metabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008144	obsolete drug binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0016070	RNA metabolic process	BP
GO:0016597	amino acid binding	MF
GO:0016874	ligase activity	MF
GO:0016875	ligase activity, forming carbon-oxygen bonds	MF
GO:0017076	purine nucleotide binding	MF
GO:0019538	protein metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0030554	adenyl nucleotide binding	MF
GO:0031406	carboxylic acid binding	MF
GO:0032553	ribonucleotide binding	MF
GO:0032555	purine ribonucleotide binding	MF
GO:0032559	adenyl ribonucleotide binding	MF
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0034660	ncRNA metabolic process	BP
GO:0035639	purine ribonucleoside triphosphate binding	MF
GO:0036094	small molecule binding	MF
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0043038	amino acid activation	BP
GO:0043039	tRNA aminoacylation	BP
GO:0043043	peptide biosynthetic process	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043169	cation binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043177	organic acid binding	MF
GO:0043436	oxoacid metabolic process	BP
GO:0043603	amide metabolic process	BP
GO:0043604	amide biosynthetic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046983	protein dimerization activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0072545	tyrosine binding	MF
GO:0090304	nucleic acid metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097367	carbohydrate derivative binding	MF
GO:0140098	catalytic activity, acting on RNA	MF
GO:0140101	catalytic activity, acting on a tRNA	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map00970	Aminoacyl-tRNA biosynthesis	-