PPGR - Gene Detail

Basic Information

Gene ID	CSS0046512.g View in Genome Browser
Position	Chr9:64204397-64208422 (-) 4025bp
Gene Type	gene
Gene Description (Protein Product)	"Intron maturase
Organism	Camellia sinensis
Also AS	AT1G74350

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CSS0048290.g Small MutS-related domain

CSS0047413.g Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family

CSS0047370.g BEST Arabidopsis thaliana protein match is Calcium-binding EF hand family protein (TAIR AT1G64850.1)

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000373	Group II intron splicing	BP
GO:0000375	RNA splicing, via transesterification reactions	BP
GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	BP
GO:0000959	mitochondrial RNA metabolic process	BP
GO:0000963	mitochondrial RNA processing	BP
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006109	regulation of carbohydrate metabolic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006396	RNA processing	BP
GO:0006397	mRNA processing	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006996	organelle organization	BP
GO:0007005	mitochondrion organization	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008380	RNA splicing	BP
GO:0009451	RNA modification	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009791	post-embryonic development	BP
GO:0009845	seed germination	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0016043	cellular component organization	BP
GO:0016070	RNA metabolic process	BP
GO:0016071	mRNA metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032881	regulation of polysaccharide metabolic process	BP
GO:0032885	regulation of polysaccharide biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043255	regulation of carbohydrate biosynthetic process	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0090351	seedling development	BP
GO:0090615	mitochondrial mRNA processing	BP
GO:0140053	mitochondrial gene expression	BP
GO:1900864	mitochondrial RNA modification	BP
GO:1901360	organic cyclic compound metabolic process	BP