Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0047507.g
View in Genome Browser
Position
Chr5:12321967-12326354 (-)
4387bp
Gene Type
gene
Gene Description (Protein Product)
Vacuolar protein sorting-associated protein VTA1 homolog
Organism
Camellia sinensis
Also AS AT4G26750

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0049044.g mitogen-activated protein kinase
CSS0048747.g 1,3-beta-glucan synthase component
CSS0049378.g Belongs to the SNF7 family
Regulatory gene
CSS0000305.g Zinc finger protein
CSS0001087.g ZINC FINGER protein
CSS0002339.g zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0002376 immune system process BP
GO:0002831 regulation of response to biotic stimulus BP
GO:0002833 positive regulation of response to biotic stimulus BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005770 late endosome CC
GO:0005771 multivesicular body CC
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009791 post-embryonic development BP
GO:0009814 defense response to other organism BP
GO:0009845 seed germination BP
GO:0010154 fruit development BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0022414 reproductive process BP
GO:0031347 regulation of defense response BP
GO:0031349 positive regulation of defense response BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032101 regulation of response to external stimulus BP
GO:0032103 positive regulation of response to external stimulus BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032879 regulation of localization BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043900 obsolete regulation of multi-organism process BP
GO:0043902 obsolete positive regulation of multi-organism process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0046983 protein dimerization activity MF
GO:0048316 seed development BP
GO:0048518 positive regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0080001 mucilage extrusion from seed coat BP
GO:0080134 regulation of response to stress BP
GO:0090351 seedling development BP
GO:0097708 intracellular vesicle CC
GO:0098542 defense response to other organism BP
GO:1900424 regulation of defense response to bacterium BP
GO:1900426 positive regulation of defense response to bacterium BP
GO:1903335 regulation of vacuolar transport BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.