PPGR - Gene Detail

Basic Information

Gene ID	CSS0047966.g View in Genome Browser
Position	Contig1274:69636-76296 (+) 6660bp
Gene Type	gene
Gene Description (Protein Product)	Cop9 signalosome complex subunit
Organism	Camellia sinensis
Also AS	AT5G14250

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CSS0049660.g Belongs to the ubiquitin-conjugating enzyme family

CSS0049238.g E3 ubiquitin-protein ligase

CSS0050407.g Belongs to the ubiquitin-conjugating enzyme family

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000338	protein deneddylation	BP
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006464	protein modification process	BP
GO:0006508	proteolysis	BP
GO:0006511	ubiquitin-dependent protein catabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007346	regulation of mitotic cell cycle	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009987	cellular process	BP
GO:0010389	regulation of G2/M transition of mitotic cell cycle	BP
GO:0010564	regulation of cell cycle process	BP
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	BP
GO:0019538	protein metabolic process	BP
GO:0019941	modification-dependent protein catabolic process	BP
GO:0030163	protein catabolic process	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043632	modification-dependent macromolecule catabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044257	protein catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044265	cellular macromolecule catabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045787	positive regulation of cell cycle	BP
GO:0045931	positive regulation of mitotic cell cycle	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051603	proteolysis involved in protein catabolic process	BP
GO:0051726	regulation of cell cycle	BP
GO:0065007	biological regulation	BP
GO:0070646	protein modification by small protein removal	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071704	organic substance metabolic process	BP
GO:0090068	positive regulation of cell cycle process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901987	regulation of cell cycle phase transition	BP
GO:1901989	positive regulation of cell cycle phase transition	BP
GO:1901990	regulation of mitotic cell cycle phase transition	BP
GO:1901992	positive regulation of mitotic cell cycle phase transition	BP
GO:1902749	regulation of cell cycle G2/M phase transition	BP
GO:1902751	positive regulation of cell cycle G2/M phase transition	BP