PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	CSS0048828.g View in Genome Browser
Position	Chr7:12914031-12916916 (-) 2885bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the ATCase OTCase family
Organism	Camellia sinensis
Also AS	AT3G20330

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	CSS0049162.g Catalyzes the oxidation of L-aspartate to iminoaspartate CSS0049731.g Aspartokinase CSS0049734.g Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
Regulatory gene	CSS0000556.g transcription factor CSS0000859.g MADS-box transcription factor CSS0002234.g Agamous-like MADS-box protein AGL12

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004070	aspartate carbamoyltransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006220	pyrimidine nucleotide metabolic process	BP
GO:0006221	pyrimidine nucleotide biosynthetic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0007154	cell communication	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009218	pyrimidine ribonucleotide metabolic process	BP
GO:0009220	pyrimidine ribonucleotide biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009260	ribonucleotide biosynthetic process	BP
GO:0009267	cellular response to starvation	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009605	response to external stimulus	BP
GO:0009987	cellular process	BP
GO:0009991	response to extracellular stimulus	BP
GO:0016036	cellular response to phosphate starvation	BP
GO:0016740	transferase activity	MF
GO:0016741	transferase activity, transferring one-carbon groups	MF
GO:0016743	carboxyl- or carbamoyltransferase activity	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0031667	response to nutrient levels	BP
GO:0031668	cellular response to extracellular stimulus	BP
GO:0031669	cellular response to nutrient levels	BP
GO:0033554	cellular response to stress	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0042594	response to starvation	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0071496	cellular response to external stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0072527	pyrimidine-containing compound metabolic process	BP
GO:0072528	pyrimidine-containing compound biosynthetic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00250	Alanine, aspartate and glutamate metabolism	-
map00240	Pyrimidine metabolism	-